Where are the Planets that Might Host Life?

In the previous posts I showed why RNA was necessary for primitive life to reproduce, but the question then is, what sort of planets will have the necessary materials? For the rocky planets, once they reached a certain size they would attract gas gravitationally, but this would be lost after the accretion disk was removed by the extreme UV put out by the new star. Therefore all atmosphere and surface water would be emitted volcanically. (Again, for the purposes of discussion, volcanic emission includes all geothermal emissions, e.g. from fumaroles.) Gas could be adsorbed on dust as it was accreted, but if it were, because heats of adsorption of the gases other than water are very similar, the amount of nitrogen would roughly equal the amount of neon. It doesn’t. (Neon is approximately at the same level as nitrogen in interstellar gas.)

The standard explanation is that since the volatiles could not have been accreted, they were delivered by something else. The candidates: comets and carbonaceous asteroids. Comets are eliminated because their water contains more deuterium than Earth’s water, and if they were the source, there would be twenty thousand times more argon. Oops. Asteroids can also be eliminated. At the beginning of this century it was shown that various isotope ratios of these bodies meant they could not be a significant source. In desperation, it was argued they could, just, if they got subducted through plate tectonics and hence were mixed in the interior. The problem here is that neither the Moon nor Mars have subduction, and there is no sign of these objects there. Also, we find that the planets have different atmospheres. Thus compared to Earth, Venus has 50% more carbon dioxide (if you count what is buried as limestone on Earth), four times more nitrogen, and essentially no water, while Mars has far less volatiles, possibly the same ratio of carbon dioxide and water but it has far too little nitrogen. How do you get the different ratios if they all came from the same source? It is reasonably obvious that no single agent can deliver such a mix, but since it is not obvious what else could have led to this result, people stick with asteroids.

There is a reasonably obvious alternative, and I have discussed the giants, and why there can be no life under-ice on Europa https://wordpress.com/post/ianmillerblog.wordpress.com/855) and reinforced by requirement to join ribose to phosphate. The only mechanism produced so far involves the purine absorbing a photon, and the ribose transmitting the effect. Only furanose sugars work, and ribose is the only sugar with significant furanose form in aqueous solution. There is not sufficient light under the ice. There are other problems for Europa. Ribose is a rather difficult sugar to make, and the only mechanism that could reasonably occur naturally is in the presence of soluble silicic acid. This requires high-temperature water, and really only occurs around fumaroles or other geothermal sites. (The terrace formations are the silica once it comes out of solution on cooling.)

So, where will we find suitable planets? Assuming the model is correct, we definitely need the dust in the accretion disk to get hot enough to form carbides, nitrides, and silicates capable of binding water. Each of those form at about 1500 degrees C, and iron melts at a bit over this temperature, but it can be lower with impurities, thus grey cast is listed as possible at 1127 degrees C. More interesting, and more complicated, are the silicates. The calcium aluminosilicates have a variety of phases that should separate from other silicate phases. They are brittle and can be easily converted to dust in collisions, but their main feature is they absorb water from the gas stream and form cements. If aggregation starts with a rich calcium aluminosilicate and there is plenty of it, it will phase separate out and by cementing other rocks and thus form a planet with plenty of water and granitic material that floats to the surface. Under this scene, Earth is optimal. The problem then is to get this system in the habitable zone, and unfortunately, while both the temperatures of the accretion disk and the habitable zone depend on the mass of the star, they appear to depend on different functions. The net result is the more common red dwarfs have their initial high-temperature zone too close to the star, and the most likely place to look for life are the G- and heavy K-type stars. The function for the accretion disk temperature depends on the rate of stellar accretion, which is unknown for mature stars but is known to vary significantly for stars of the same mass, thus LkCa 15b is three times further away than Jupiter from an equivalent mass star. Further, the star must get rid of its accretion disk very early or the planets get too big. So while the type of star can be identified, the probability of life is still low.

How about Mars? Mars would have been marginal. The current supply of nitrogen, including what would be lost to space, is so low life could not emerge, but equally there may be a lot of nitrogen in the solid state buried under the surface. We do not know if we can make silicic acid from basalt under geochemical conditions and while there are no granitic/felsic continents there, there are extrusions of plagioclase, which might do. My guess is the intermittent periods of fluid flow would have been too short anyway, but it is possible there are chemical fossils there of what the path towards life actually looked like. For me, they would be of more interest than life itself.

To summarise what I have proposed:

  • Planets have compositions dependent on where they form
  • In turn, this depends on the temperatures reached in the accretion disk
  • Chemicals required for reproduction formed at greater than 1200 degrees C in the accretion disk, and possibly greater than 1400 degrees C
  • Nucleic acids can only form, as far as we know, through light
  • Accordingly, we need planets with reduced nitrogen, geothermal processing, and probably felsic/granitic continents that end in the habitable zone.
  • The most probable place is around near-earth-sized planets around a G or heavy K type star
  • Of those stars, only a modest proportion will have planets small enough

Thus life-bearing planets around single stars are likely to be well-separated. Double stars remain unknown quantities regarding planets. This series has given only a very slight look at the issues. For more details, my ebook Planetary Formation and Biogenesis(http://www.amazon.com/dp/B007T0QE6I) has far more details.

Why Life Must Start with RNA and not Something Else.

In the previous post, I argued that reproduction had to start with RNA, but that leaves the obvious question, why not something else? The use of purines and pyrimidines to transfer energy arises simply because the purines and pyrimidines are the easiest to form, given the earliest atmosphere almost certainly was rich in ammonia, hydrogen cyanide, cyanocetylene, and urea would soon be formed. Some may argue with the “easily formed”, however leaving a sample of ammonium cyanide and urea to its own devices will get nucleobases. Cytosine is a little more difficult, but with available cyanoacetylene, it is reasonably likely. The important point is that if you accept my mechanism for how rocky planets form, these chemicals are going to be prolific. I shall justify that later. The important thing about these chemicals is that they lead to the formation of multiple hydrogen bonds only with their partners. As explained in the last post, there is no alternative to hydrogen bonds for transferring information, and these are the only chemicals that can provide accuracy under abiogenic conditions.

The polymer linking agent is phosphate, so why phosphate? Phosphoric acid has three hydrogen atoms that are available for substitution, i.e.it can form three functions. Two are to form esters and as I noted previously, the third is to provide solubility. The solubility is important because if there was not anionic repulsion, the strands would bundle together and reproduction would not work. The strands would also not provide catalysis, which occurs because a strand can fold around a cation like magnesium and form the shapes that seem to be needed. The good news is that unlike in enzymes, it can rearrange the magnesium and thus get different effects. Of course, enzymes are hugely more effective, but an enzyme generally only does one thing.

The polymer forms esters by phosphate bonding to a sugar. Think of the reaction as

P – OH  + HO – C    ->  P – O – C  + H2O       (1)

where P is the phosphorus of a phosphate or phosphoric acid, and C is the carbon atom of a sugar. Note that this reaction is reversible, but at room temperature the bonds are quite stable. These ester bonds are very strong, which is important because you do not want your carefully prepared polymer to randomly fall to bits. On the other hand, it must be able to be disrupted or substituted and not be essentially fixed, as would happen if proteins were used for information transfer. The reason is, life is evolving by random trials, and it is important that since many of these trials will be unproductive, there has to be a way to recover an many of the valuable chemicals as possible for further trials, and also to unclutter the system so that something that conveys advantages does not get lost in the morass of failures or otherwise useless stuff. Only phosphate offers these properties. In principle, you might argue for arsenate, but its bonds are weaker, thus less reliable, and worse, arsenic reacts with hydrogen sulphide (common around fumaroles which as we shall see are necessary sites) to form insoluble sulphides. These are the very pretty yellow layers in geothermal areas. No other element will do.

There are a variety of other sugars that if used to link nucleobases to phosphate will form duplexes, so the question then is, why weren’t they used? The ability to catalyse its own scission is the first of two reasons why ribose is so important. Once the strands get long enough to fold around themselves, catalysis starts, and one of the possible catalytic reactions is the promotion of the remaining OH group on the ribose to help water send the reaction (1) into reverse, which would break a link in the polymer chain. Deoxyribose does not have such a free hydroxyl and hence does not have this option, which is why DNA ended up being the information transfer chemical once a life form that had something worth keeping had emerged. What this means is that RNA has the opportunity to mutate, which is a big help in getting evolution going, and when it is broken, the bits remain available for further tries in some rearranged form.

The question then is, how do you form the phosphate ester? You mix phosphate and the sugar in solution and – oops, nothing happens. Reaction (1) is so slow at ambient temperature that you could sit there indefinitely, however, if you heat it, it does proceed. However, the rate of a reaction like this depends on the product of the concentrations on each side, with such a product on the right-hand side determining the rate of the reaction going from right to left. If you look at (1), it probably occurs to you that in aqueous solution, the concentration of water is far greater than the concentration of sugar. You will see people say that life could start around black smokers, but when you check, at the temperatures they require for the forward reaction to go it requires the concentration of water to be less than about 2%. Good luck getting that at the bottom of the ocean. You may protest that nevertheless there is life there, devouring emerging nutrients. True, although the ocean acts as a cooling bath, and the life forms have evolved protective systems. There are no such things when life is getting started. Life has moved to be close to black smokers but it did not start there.

What we need is a more precise way of delivering the required energy to the reaction site. So far, one and only one method has been found to make such initial linkages, and that is photochemical. If adenine is irradiated with light in the presence of ribose and phosphate, you get AMP, and even ATP. We now see why only ribose was chosen. AMP, and for that matter, RNA, link the nucleobases and phosphate through the ribofuranose form. Such sugars can exist in two forms: a furanose (a five-membered ring involving an oxygen atom linked to C1 of the sugar) and a pyranose form (the six-membered equivalent.). Now the first important point about a sugar is it cannot transmit electronic effects arising from the nucleobase absorbing a photon. However, it can transmit mechanical vibrational energy, and this is where the furanose becomes important. While the pyranose form is always rigid, the furanose form is flexible. The reason ribofuranose can form the links, in my opinion, is it can transmit and focus the mechanical energy to the free C-5 which will vibrate vigorously like the end of a whip and form the phosphate ester. Ribose is important because it is the only sugar with a reasonable amount of furanose form in aqueous solution. It is also worth noting that in the original experiments, no phosphate ester was formed from the pyranose form. As the furanose is used, the equilibrium ensures pyranose maintains the furanose/pyranose ratio.

That leaves open the question, how are the polymers formed? It appears that provided you can get the mers embedded in a lipid micelle or vesicle (the most primitive form of the cell wall), leaving these in the sun on a hot rock to dry them out leads to polymers of about 80 units in an hour. This is the first reason why life probably started around geothermal vents on land. Plenty of hot rocks around, with water splashes to replenish the supply of mers, and sunlight to form them. The second reason will be in the following post.

The title statement can now be answered. Life must start with RNA because it is the only agent that can lead to biological reproduction without external assistance. I started the last post indicating I would show what sort of planets might harbour life. The series is nearly there, but some might like to try the last step for themselves.